I may be mis-understanding.... but you can disconnect the triangular connector at the radiator switch, and jump from two out of three leads... that will run the fans (assuming the module is okay)... one way should give you high speeds, one way low speeds.
I have actually had two occasions where the new fan control module have been bad... not just the aftermarket ones either....
Like Travis said, sometimes the aux. fuse panel will go bad, and the fuse get hot, but still appear to be good. That's the number one culprit for the failed fans.
But, worst case scenario, I have seen both fans be dead. Usually you ride around with one dead, and don't even notice, untill the second one craps out.